RCSBProteinDataBank | What is in a Computed Structure Model? Meet AlphaFold and RoseTTAFold @RCSBProteinDataBank | Uploaded 1 year ago | Updated 3 hours ago
Presenter:
Brinda Vallat
Scientific Software Developer/PDB-Dev Representative and ModelCIF Manager
RCSB PDB/Rutgers
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In August 2022, the RCSB PDB enabled access to ~1 million Computed Structure Models (CSMs) from AlphaFoldDB and RoseTTAFold in addition to the ~200,000 experimentally-determined PDB structures on the RCSB.org website.

On September 22, 2022 a Virtual Crash Course was held to inform the RCSB.org users how to search, visualize, and analyze CSMs alongside experimentally-determined PDB structures using the custom-developed RCSB PDB tools.

How Neurons Communicate: An Introduction to Neurotransmission and Action Potential (from PDB-101)

Extracting data from mmCIF files using the RCSB PDB API

Exploring Computed Structure Models on RCSB.org - Introduction

PDBx/mmCIF format - Not your parents’ legacy PDB format

Computed Structure Models: Confidence Levels in 3D Predictions

Pika the p21: Protector of the Cell Cycle

Introduction to Python and to Jupyter Notebooks

Computed Structure Models: Visualization, Validation, and Alignments

Leveraging RCSB PDB APIs for Bioinformatics Analyses and Machine Learning

What is in a Computed Structure Model? Meet AlphaFold and RoseTTAFold @RCSBProteinDataBank