Python Scripting for Molecular Docking: Docking Preparation @RCSBProteinDataBank
Python Scripting for Molecular Docking: Docking Preparation  @RCSBProteinDataBank
Uploaded September 2024 | Updated September 2026, 1 week ago
In this workshop, Python scripting and libraries are used to explore ligand binding to enzymes. This course was developed by Paul A. Craig (Rochester Institute of Technology) and Jessica A. Nash (Molecular Sciences Software Institute).

Full course on PDB-101 with links to corresponding Jupyter Notebooks and development environment set up instructions:
pdb101.rcsb.org/train/training-events/python3

If you have little or no prior coding experience with Python, you are encouraged to go through the two previous PDB-101 courses on Python:
Python Scripting for Biochemistry & Molecular Biology | Part 1 (pdb101.rcsb.org/train/training-events/python)
Python Scripting for Biochemistry & Molecular Biology | Part 2 (pdb101.rcsb.org/train/training-events/python2)
Python Scripting for Molecular Docking: Docking PreparationGregory Petsko | Truth Sometimes Triumphs: A History of Structural EnzymologyPDB50 at the ACA: Day 2 Introduction, David Rose, University of WaterlooMolecular Machinery: A TourPython Scripting for Molecular Docking: Docking with AutoDock VinaPDB50 at the ACA: Day 1 | Rafael M. Couñago, SGC/UNICAMP, BrazilDay 2 | Session 4 | Chair: Shoshana WodakTarget Zero: Preventing HIV TransmissionCodeBMB: Computational Literacy for Biochemistry and Molecular Biology EducationHappy Holidays from RCSB PDBUnderstanding, Monitoring, and Treating DiabetesPDB50: Celebrating PDB Contributions from Rutgers | Joe Marcotrigiano
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Python Scripting for Molecular Docking: Docking Preparation

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