Tutorial 1 – Getting Started with UCSF Chimera @RCSBProteinDataBank
Tutorial 1 – Getting Started with UCSF Chimera  @RCSBProteinDataBank
Uploaded December 2021 | Updated September 2026, 1 week ago
This tutorial series will enable viewers to become proficient in using UCSF Chimera (https://www.cgl.ucsf.edu/chimera/), an extensible molecular modeling software. Topics covered range from foundational selections and actions to more complex subjects like structure analysis and animation.

Access the full series: pdb101.rcsb.org/learn/videos/visualizing-pdb-structures-with-ucsf-chimera

Video Guide:

00:00 Introduction to UCSF Chimera
00:12 Understanding macromolecule data from rcsb.org
01:09 Chimera software download and orientation
01:47 Opening and importing structure files
02:23 Mouse controls for structure manipulation
03:10 Saving an image from the graphics window
04:13 Saving, restoring, and ending a session in Chimera
04:36 Biological assembly vs. Asymmetric unit
Tutorial 1 – Getting Started with UCSF ChimeraProtein Data Bank at 50 years of age | Stephen BurleyPDB50 at BPS: Ruth NussinovHow to Use the Beta PDB Archive and Extended PDB IDs TodayExploring Computed Structure Models on RCSB.org - IntroductionRCSB PDB Office Hour: PDB Policies for Deposition and BiocurationExploring Integrative Structures with RCSB.orgPython Scripting for Molecular Docking: Manipulating Molecules with RDKitMethods for Determining Atomic Structures: X-ray Crystallography (from PDB-101)Day 2 | Session 3 | Johann DeisenhoferTutorial 4 – Further Depiction OptionsPython For Cheminformatics-Driven Molecular Docking: Digital Representations of Molecules
RCSBProteinDataBank |

Tutorial 1 – Getting Started with UCSF Chimera

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