The Basics of Biomolecular Visualization @MolecularMemory
The Basics of Biomolecular Visualization  @MolecularMemory
Uploaded August 2018 | Updated September 2026, 1 hour ago
Dr. KP takes you on a journey into an actual protein crystal structure. From the individual amino acids through the tertiary structure, interactively explore the macromolecules that are carrying out and the chemical reactions and essential cellular functions keeping you alive right now. I’ve added some cool “extras” to the 2D video: some photos from my protein crystallography days, and images and annotations better explain some of the renderings.

Link to watch the 3D version of this video: youtu.be/f0lc_eeoFVc

PyMOL molecular modeling software (free for students!) pymol.org/edu/?q=educational
Download thousands of crystal structures (and other types of structures) from the Protein Data Bank: rcsb.org
The Basics of Biomolecular VisualizationHexokinase: A VR ExperienceSARS-CoV-2 Structure (COVID-19 Coronavirus)Retrosynthesis (Part 1): Choosing a DisconnectionUnderstanding PHI and PSI Angles, Ramachandran Plots, & Newman ProjectionsHexokinase: A VR Experience (2D version)Bonding Cheat Sheet: Valence & Formal Charge in Organic MoleculesAlkene Reactions 1: Markovnikov Addition & Rearrangement10 ChemDraw Tricks Every Grad Student Should KnowPyruvate Dehydrogenase Mechanism: The Chemistry of TPPCoenzyme A ChemistryElectrophilic Aromatic Substitution: Sulfonation of Benzene
Molecular Memory |

The Basics of Biomolecular Visualization

SHARE TO X SHARE TO REDDIT SHARE TO FACEBOOK WALLPAPER