Uploaded August 2025 | Updated September 2026, 2 weeks ago
Molecular Geometry When Central Atom has One or More Lone Pairs
Dr. DeBacco
Lone Pairs Impact on Geometry
Lone pairs affect geometry because they repel bonding pairs more strongly, altering bond angles and overall shape.
Step-by-Step Guide Using VSEPR Theory
Draw the Lewis Structure
Count valence electrons.
Place lone pairs and bonds around the central atom.
Count Electron Groups Around the Central Atom
Each bond (single, double, triple) counts as one group.
Each lone pair counts as one group.
Determine Electron Geometry
Based on total electron groups:
Determine Molecular Geometry
Now subtract lone pairs and look at the positions of atoms only:
Adjust Bond Angles
Lone pairs push bonding pairs closer together.
Typical bond angles shrink:
Tetrahedral: 109.5° → Trigonal pyramidal: ~107° → Bent: ~104.5°
Link to Lecture Slides: drive.google.com/file/d/1ifFAf5d0csoE50rPiZ5dE72CXiSnAbi6/view?usp=drive_link
*Due to the description character limit the full work cited for "Molecular Geometry When Central Atom has One or More Lone Pairs" can be viewed at... docs.google.com/document/d/1wrJzprnh3fNKK-SLJjib3YNuwLcVt-IY/edit?usp=drive_link&ouid=104237452697237972847&rtpof=true&sd=true
Molecular Geometry When Central Atom has One or More Lone Pairs
Dr. DeBacco
Lone Pairs Impact on Geometry
Lone pairs affect geometry because they repel bonding pairs more strongly, altering bond angles and overall shape.
Step-by-Step Guide Using VSEPR Theory
Draw the Lewis Structure
Count valence electrons.
Place lone pairs and bonds around the central atom.
Count Electron Groups Around the Central Atom
Each bond (single, double, triple) counts as one group.
Each lone pair counts as one group.
Determine Electron Geometry
Based on total electron groups:
Determine Molecular Geometry
Now subtract lone pairs and look at the positions of atoms only:
Adjust Bond Angles
Lone pairs push bonding pairs closer together.
Typical bond angles shrink:
Tetrahedral: 109.5° → Trigonal pyramidal: ~107° → Bent: ~104.5°
Link to Lecture Slides: drive.google.com/file/d/1ifFAf5d0csoE50rPiZ5dE72CXiSnAbi6/view?usp=drive_link
*Due to the description character limit the full work cited for "Molecular Geometry When Central Atom has One or More Lone Pairs" can be viewed at... docs.google.com/document/d/1wrJzprnh3fNKK-SLJjib3YNuwLcVt-IY/edit?usp=drive_link&ouid=104237452697237972847&rtpof=true&sd=true
![Testing and Screening Protocol for Hop Latent Viroid (HLVd)
Testing and Screening Protocol for Hop Latent Viroid (HLVd)
Professor DeBacco
Tassa Saldi, PhD: Interview
We The Growers. (2022, March 17). Tassa Saldi, PhD – CoFounder and CEO of TUMI Genomics – E.11 [Video]. YouTube. https://www.youtube.com/watch?v=9JT2RjIkfGQ
Leaves Was the Standard
This does work
Petioles are slightly better
However, latest data indicates early accumulation in the root tissue before it saturates the plant and will show-up with reliability in the leaves throughout the plant.
Mother Plant (2 months and older)
Four leaf/petiole samples at different areas of the plant.
Systematic sampling throughout the canopy.
Root samples can be hard to get and do physical damage so leaves/petioles are preferred for this stage of plant development.
2 Months and Younger
Go for a root sample
This is because of the early accumulation here, the viroid load will likely be elevated improving the odds for detection on a young plant.
Frequency… Depends
Are you going to be keeping and/or cloning the plant?
Ideal window is 2-4 weeks to ensure continual screening to catch something early
2 weeks = best for actively growing plants
4 weeks = best for established plants
Plant Quarantine
If you bringing plants in there should be a 30-day quarantine to allow for proper evaluation and screening.
This may require multiple screenings to ensure only “clean” plants are brought in as part of the growing operation.
If You Get a Positive…
Isolate the plant and remove it
Full plant tag, bag and disposal is advised.
Remember it is transmitted by physical damage and sap transfer.
Also, the roots can have some of the highest viroid loads be avoid transfer contact of these as well.
Link to Lecture Slides: https://drive.google.com/file/d/1RKqfyPjDoJZ-yB110Zea5Aw5ZqnNwpLK/view?usp=drive_link
*Due to the description character limit the full work cited for Testing and Screening Protocol for Hop Latent Viroid (HLVd) can be viewed at... https://docs.google.com/document/d/1tL_j0pqLTHHaFc3u293sQfnjy5wvZZ7d/edit?usp=drive_link&ouid=104237452697237972847&rtpof=true&sd=true Testing and Screening Protocol for Hop Latent Viroid (HLVd)](https://i.ytimg.com/vi/vSvrgh6bMVM/mqdefault.jpg)









