RCSBProteinDataBank | Advanced Searching, Group Summary Pages, and 1D-3D Tool @RCSBProteinDataBank | Uploaded 1 year ago | Updated 3 hours ago
Presenter:
Joan Segura
Scientific Software Developer, RCSB PDB/UCSD

In August 2022, the RCSB PDB enabled access to ~1 million Computed Structure Models (CSMs) from AlphaFoldDB and RoseTTAFold in addition to the ~200,000 experimentally-determined PDB structures on the RCSB.org website.

On September 22, 2022 a Virtual Crash Course was held to inform the RCSB.org users how to search, visualize, and analyze CSMs alongside experimentally-determined PDB structures using the custom-developed RCSB PDB tools.

Python Scripting for Biochemistry &Molecular Biology - Part 2 Introduction

Reading and Writing Files using Python and Jupiter Notebooks

Understanding PDBx/mmCIF: Course Introduction

Visualizing PDB structures in the Jupyter Notebooks

Programmatic data access and analysis using PDBx/mmCIF files, Part 2

PDB50 at the ACA: Day 1 | John Rubinstein, Sick Kids Hospital

Leveraging RCSB PDB APIs for Bioinformatics Analyses and Machine Learning Part 2

Protein Candidates from Function Queries in KBase

Advanced Searching, Group Summary Pages, and 1D-3D Tool @RCSBProteinDataBank